You can visualize the trajectory (dump file) with the program OVITO
(www.ovito.org). You will have to define few parameters, though.
Invoke ovito using:

ovito traj.lammpstrj

On the right panel of ovito, under the section "LAMMPS dump"
click on "File contains a time series" to display the entire trajectory.

Then click the button "Edit column mapping" and enter the fields as specified
in the "README_visualization_OVITO_settings.png" file located here:

https://github.com/jewettaij/moltemplate/blob/master/examples/coarse_grained/MOLC/

Otello M. Roscioni
roscioni@gmail.com
